I have been searching for a bit and if its was obvious I apologize but the only reference I see to how to set the checkbox checked is this post but it has no answer.
How do I default the checkbox checked instead of unchecked?
https://www.koolreport.com/forum/topics/1349
<strong>File Name</strong>
<?php
CheckBoxList::create(array(
"name"=>"file_name",
"data"=>$g_misc_info->_misc_all_file_groups
));
?>